GDAL installation on MAC OSX via conda fails, linked due to Libpoppler and font configurationTrying to...
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GDAL installation on MAC OSX via conda fails, linked due to Libpoppler and font configuration
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When installing GDAL via Conda, install fails, on OSX Mojave and Python 3.7:
dlopen(/Users/tomkom/anaconda3/lib/python3.7/site-packages/osgeo/_gdal.cpython-37m-darwin.so, 2): Library not loaded: @rpath/libfontconfig.1.dylib
Referenced from: /Users/tomkom/anaconda3/lib/libpoppler.78.dylib
Reason: Incompatible library version: libpoppler.78.dylib requires version 14.0.0 or later, but libfontconfig.1.dylib provides version 13.0.0
I am unable to locate the cause. Installed using:
conda install -c conda-forge gdal
As per standard.
The error seems to indicate issues with libpoppler and a font library (libfontconfig). I am unsure about the role of these libraries and how to update them.
python gdal conda
asked Mar 26 at 6:11
MartinTMartinT
38919
|
show 2 more comments
When installing GDAL via Conda, install fails, on OSX Mojave and Python 3.7:
dlopen(/Users/tomkom/anaconda3/lib/python3.7/site-packages/osgeo/_gdal.cpython-37m-darwin.so, 2): Library not loaded: @rpath/libfontconfig.1.dylib
Referenced from: /Users/tomkom/anaconda3/lib/libpoppler.78.dylib
Reason: Incompatible library version: libpoppler.78.dylib requires version 14.0.0 or later, but libfontconfig.1.dylib provides version 13.0.0
I am unable to locate the cause. Installed using:
conda install -c conda-forge gdal
As per standard.
The error seems to indicate issues with libpoppler and a font library (libfontconfig). I am unsure about the role of these libraries and how to update them.
python gdal conda
asked Mar 26 at 6:11
MartinTMartinT
38919
i recommend installing your gis stack into a new environment: e.g.,conda create --name=gis python=3.6 gdal geopandas rasterio ipykernel --channel=conda-forge
– Paul H
Mar 26 at 22:17
@PaulH Any suggestion why forcing python to a lower version? Mine is 3.7. I would need to install an older one... Also, why ipykernel?
– MartinT
Mar 26 at 22:52
1
Lower version: I'm not sure e.g. geopandas and rasterio are available on python 3.7 yet. Even if they are available for Python 3.7, since so much of the GIS stack is written in C, compiled, and linked together, it's definitely better to install everything at the same time, and from a single channel (I prefer conda-forge). You need the ipykernel to let the environment talk to whatever jupyer notebook or jupyter lab server you have running, if you have one running, which I recommend you do.
– Paul H
Mar 26 at 23:05
1
I just did a quickconda searchfor gdal and geopandas and python 3.7 builds are available. pick which ever python you want, but use a fresh environment in either case.
– Paul H
Mar 26 at 23:13
Thanks for the hints. A clean environment helped with a different downstream issue, yet standalone GDAL still has issues with the fonts. This is what I am waiting for as an answer - clarification why fonts should be a problem, how to resolve this issue, and why this happens now on Mojave, not before.
– MartinT
Apr 1 at 2:27
|
show 2 more comments
When installing GDAL via Conda, install fails, on OSX Mojave and Python 3.7:
dlopen(/Users/tomkom/anaconda3/lib/python3.7/site-packages/osgeo/_gdal.cpython-37m-darwin.so, 2): Library not loaded: @rpath/libfontconfig.1.dylib
Referenced from: /Users/tomkom/anaconda3/lib/libpoppler.78.dylib
Reason: Incompatible library version: libpoppler.78.dylib requires version 14.0.0 or later, but libfontconfig.1.dylib provides version 13.0.0
I am unable to locate the cause. Installed using:
conda install -c conda-forge gdal
As per standard.
The error seems to indicate issues with libpoppler and a font library (libfontconfig). I am unsure about the role of these libraries and how to update them.
python gdal conda
asked Mar 26 at 6:11
MartinTMartinT
38919
When installing GDAL via Conda, install fails, on OSX Mojave and Python 3.7:
dlopen(/Users/tomkom/anaconda3/lib/python3.7/site-packages/osgeo/_gdal.cpython-37m-darwin.so, 2): Library not loaded: @rpath/libfontconfig.1.dylib
Referenced from: /Users/tomkom/anaconda3/lib/libpoppler.78.dylib
Reason: Incompatible library version: libpoppler.78.dylib requires version 14.0.0 or later, but libfontconfig.1.dylib provides version 13.0.0
I am unable to locate the cause. Installed using:
conda install -c conda-forge gdal
As per standard.
The error seems to indicate issues with libpoppler and a font library (libfontconfig). I am unsure about the role of these libraries and how to update them.
python gdal conda
python gdal conda
asked Mar 26 at 6:11
MartinTMartinT
38919
asked Mar 26 at 6:11
MartinTMartinT
38919
edited 13 mins ago
MartinT
asked Mar 26 at 6:11
MartinTMartinT
38919
asked Mar 26 at 6:11
MartinTMartinT
38919
asked Mar 26 at 6:11
MartinTMartinT
38919
38919
i recommend installing your gis stack into a new environment: e.g.,conda create --name=gis python=3.6 gdal geopandas rasterio ipykernel --channel=conda-forge
– Paul H
Mar 26 at 22:17
@PaulH Any suggestion why forcing python to a lower version? Mine is 3.7. I would need to install an older one... Also, why ipykernel?
– MartinT
Mar 26 at 22:52
1
Lower version: I'm not sure e.g. geopandas and rasterio are available on python 3.7 yet. Even if they are available for Python 3.7, since so much of the GIS stack is written in C, compiled, and linked together, it's definitely better to install everything at the same time, and from a single channel (I prefer conda-forge). You need the ipykernel to let the environment talk to whatever jupyer notebook or jupyter lab server you have running, if you have one running, which I recommend you do.
– Paul H
Mar 26 at 23:05
1
I just did a quickconda searchfor gdal and geopandas and python 3.7 builds are available. pick which ever python you want, but use a fresh environment in either case.
– Paul H
Mar 26 at 23:13
Thanks for the hints. A clean environment helped with a different downstream issue, yet standalone GDAL still has issues with the fonts. This is what I am waiting for as an answer - clarification why fonts should be a problem, how to resolve this issue, and why this happens now on Mojave, not before.
– MartinT
Apr 1 at 2:27
|
show 2 more comments
i recommend installing your gis stack into a new environment: e.g.,conda create --name=gis python=3.6 gdal geopandas rasterio ipykernel --channel=conda-forge
– Paul H
Mar 26 at 22:17
@PaulH Any suggestion why forcing python to a lower version? Mine is 3.7. I would need to install an older one... Also, why ipykernel?
– MartinT
Mar 26 at 22:52
1
Lower version: I'm not sure e.g. geopandas and rasterio are available on python 3.7 yet. Even if they are available for Python 3.7, since so much of the GIS stack is written in C, compiled, and linked together, it's definitely better to install everything at the same time, and from a single channel (I prefer conda-forge). You need the ipykernel to let the environment talk to whatever jupyer notebook or jupyter lab server you have running, if you have one running, which I recommend you do.
– Paul H
Mar 26 at 23:05
1
I just did a quickconda searchfor gdal and geopandas and python 3.7 builds are available. pick which ever python you want, but use a fresh environment in either case.
– Paul H
Mar 26 at 23:13
Thanks for the hints. A clean environment helped with a different downstream issue, yet standalone GDAL still has issues with the fonts. This is what I am waiting for as an answer - clarification why fonts should be a problem, how to resolve this issue, and why this happens now on Mojave, not before.
– MartinT
Apr 1 at 2:27
i recommend installing your gis stack into a new environment: e.g.,
conda create --name=gis python=3.6 gdal geopandas rasterio ipykernel --channel=conda-forge– Paul H
Mar 26 at 22:17
i recommend installing your gis stack into a new environment: e.g.,
conda create --name=gis python=3.6 gdal geopandas rasterio ipykernel --channel=conda-forge– Paul H
Mar 26 at 22:17
@PaulH Any suggestion why forcing python to a lower version? Mine is 3.7. I would need to install an older one... Also, why ipykernel?
– MartinT
Mar 26 at 22:52
@PaulH Any suggestion why forcing python to a lower version? Mine is 3.7. I would need to install an older one... Also, why ipykernel?
– MartinT
Mar 26 at 22:52
1
1
Lower version: I'm not sure e.g. geopandas and rasterio are available on python 3.7 yet. Even if they are available for Python 3.7, since so much of the GIS stack is written in C, compiled, and linked together, it's definitely better to install everything at the same time, and from a single channel (I prefer conda-forge). You need the ipykernel to let the environment talk to whatever jupyer notebook or jupyter lab server you have running, if you have one running, which I recommend you do.
– Paul H
Mar 26 at 23:05
Lower version: I'm not sure e.g. geopandas and rasterio are available on python 3.7 yet. Even if they are available for Python 3.7, since so much of the GIS stack is written in C, compiled, and linked together, it's definitely better to install everything at the same time, and from a single channel (I prefer conda-forge). You need the ipykernel to let the environment talk to whatever jupyer notebook or jupyter lab server you have running, if you have one running, which I recommend you do.
– Paul H
Mar 26 at 23:05
1
1
I just did a quick
conda search for gdal and geopandas and python 3.7 builds are available. pick which ever python you want, but use a fresh environment in either case.– Paul H
Mar 26 at 23:13
I just did a quick
conda search for gdal and geopandas and python 3.7 builds are available. pick which ever python you want, but use a fresh environment in either case.– Paul H
Mar 26 at 23:13
Thanks for the hints. A clean environment helped with a different downstream issue, yet standalone GDAL still has issues with the fonts. This is what I am waiting for as an answer - clarification why fonts should be a problem, how to resolve this issue, and why this happens now on Mojave, not before.
– MartinT
Apr 1 at 2:27
Thanks for the hints. A clean environment helped with a different downstream issue, yet standalone GDAL still has issues with the fonts. This is what I am waiting for as an answer - clarification why fonts should be a problem, how to resolve this issue, and why this happens now on Mojave, not before.
– MartinT
Apr 1 at 2:27
|
show 2 more comments
1 Answer
1
active
oldest
votes
Maybe this tutorial may help you.
https://hackernoon.com/install-python-gdal-using-conda-on-mac-8f320ca36d90
answered Mar 26 at 6:39
DanielDaniel
645
We're looking for long answers that provide some explanation and context. Don't just give a one-line answer; explain why your answer is right, ideally with citations. Answers that don't include explanations may be removed.
2
Links rot. Therefore you should summarize what's in the link. Otherwise this is a low quality answer and should be a comment.
– Paul H
Mar 26 at 23:04
add a comment |
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1 Answer
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1 Answer
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oldest
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Maybe this tutorial may help you.
https://hackernoon.com/install-python-gdal-using-conda-on-mac-8f320ca36d90
answered Mar 26 at 6:39
DanielDaniel
645
We're looking for long answers that provide some explanation and context. Don't just give a one-line answer; explain why your answer is right, ideally with citations. Answers that don't include explanations may be removed.
2
Links rot. Therefore you should summarize what's in the link. Otherwise this is a low quality answer and should be a comment.
– Paul H
Mar 26 at 23:04
add a comment |
Maybe this tutorial may help you.
https://hackernoon.com/install-python-gdal-using-conda-on-mac-8f320ca36d90
answered Mar 26 at 6:39
DanielDaniel
645
We're looking for long answers that provide some explanation and context. Don't just give a one-line answer; explain why your answer is right, ideally with citations. Answers that don't include explanations may be removed.
2
Links rot. Therefore you should summarize what's in the link. Otherwise this is a low quality answer and should be a comment.
– Paul H
Mar 26 at 23:04
add a comment |
Maybe this tutorial may help you.
https://hackernoon.com/install-python-gdal-using-conda-on-mac-8f320ca36d90
answered Mar 26 at 6:39
DanielDaniel
645
Maybe this tutorial may help you.
https://hackernoon.com/install-python-gdal-using-conda-on-mac-8f320ca36d90
answered Mar 26 at 6:39
DanielDaniel
645
answered Mar 26 at 6:39
DanielDaniel
645
answered Mar 26 at 6:39
DanielDaniel
645
answered Mar 26 at 6:39
DanielDaniel
645
645
We're looking for long answers that provide some explanation and context. Don't just give a one-line answer; explain why your answer is right, ideally with citations. Answers that don't include explanations may be removed.
We're looking for long answers that provide some explanation and context. Don't just give a one-line answer; explain why your answer is right, ideally with citations. Answers that don't include explanations may be removed.
2
Links rot. Therefore you should summarize what's in the link. Otherwise this is a low quality answer and should be a comment.
– Paul H
Mar 26 at 23:04
add a comment |
2
Links rot. Therefore you should summarize what's in the link. Otherwise this is a low quality answer and should be a comment.
– Paul H
Mar 26 at 23:04
2
2
Links rot. Therefore you should summarize what's in the link. Otherwise this is a low quality answer and should be a comment.
– Paul H
Mar 26 at 23:04
Links rot. Therefore you should summarize what's in the link. Otherwise this is a low quality answer and should be a comment.
– Paul H
Mar 26 at 23:04
add a comment |
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i recommend installing your gis stack into a new environment: e.g.,
conda create --name=gis python=3.6 gdal geopandas rasterio ipykernel --channel=conda-forge– Paul H
Mar 26 at 22:17
@PaulH Any suggestion why forcing python to a lower version? Mine is 3.7. I would need to install an older one... Also, why ipykernel?
– MartinT
Mar 26 at 22:52
1
Lower version: I'm not sure e.g. geopandas and rasterio are available on python 3.7 yet. Even if they are available for Python 3.7, since so much of the GIS stack is written in C, compiled, and linked together, it's definitely better to install everything at the same time, and from a single channel (I prefer conda-forge). You need the ipykernel to let the environment talk to whatever jupyer notebook or jupyter lab server you have running, if you have one running, which I recommend you do.
– Paul H
Mar 26 at 23:05
1
I just did a quick
conda searchfor gdal and geopandas and python 3.7 builds are available. pick which ever python you want, but use a fresh environment in either case.– Paul H
Mar 26 at 23:13
Thanks for the hints. A clean environment helped with a different downstream issue, yet standalone GDAL still has issues with the fonts. This is what I am waiting for as an answer - clarification why fonts should be a problem, how to resolve this issue, and why this happens now on Mojave, not before.
– MartinT
Apr 1 at 2:27